Table 3: Subtyping of HTLV-1 LTR region LASP using the HTLV-1 Automated subtyping Tool (Version 1.0).
|
Name |
Length |
Report |
Assignment |
Support |
Genome |
|
LTR10_consensus_sequenceNEW |
605bp |
subtype_a(subgroup_A)(Transcontinental) |
100.0 |
||
|
LTR12_consensus_sequenceNEW |
605bp |
subtype_a(subgroup_A)(Transcontinental) |
100.0 |
||
|
LTR14_consensus_sequenceNEW |
607bp |
subtype_a(subgroup_A)(Transcontinental) |
98.0 |
||
|
LTR17_consensus_sequenceNEW |
606bp |
subtype_a(subgroup_A)(Transcontinental) |
96.0 |
||
|
LTR20_consensus_sequenceNEW |
605bp |
subtype_a(subgroup_A)(Transcontinental) |
100.0 |
||
|
LTR_24_consensus_sequenceNEW |
605bp |
subtype_a(subgroup_A)(Transcontinental) |
94.0 |
* Only bootstrap values above 70% were considered significant and described.