Table 2: Characteristics of terminal repeat sites of HV DNAs, lacked genes (H-SITES).
HHV | 5'TR | 3'TR | ||||
size (nt) | Hits (D) | T (nt) | size (nt) | Hits (D) | T (nt) | |
1 | 512 (399) | 50.4 | 1171 (399) | 50.7 | ||
2 | 440 (254) | 20.0 | 919 (254) | 46.0 | ||
3 | 588 | 10.7 | 308 | 13.7 | ||
4 | 534 (x4) | 10.0 | 354 (x4) | 10.0 | ||
5 | 1323 (578) | 00.0 | 2538 (578) | 02.1 | ||
6A | 500 | 24.9 | 300 | 434 | 82.6 | 402 |
6B | 582 | 57.7 | 296 | 544 | 85.6 | 456 |
7 | 4465 | 87.5 | 4055 | 1014 | 68.8 | 848 |
8 | 801 (x20) | 12.0 | 801 (x20) | 12.0 | ||
GaHV2 | 1517 | 37.8 | 377 | 3227 | 35.9 | 377 |
TR - HV DNA terminal region, t nt - Size of the telomere-like regions. In brackets, the size of section a' (for HHV 1, 2 and 5, or the approximate number of tandem end-repeats - for HHV 4 and 8). The dark line is mardivirus 2. In brackets, the size of site a' (for HHV 1, 2 and 5), or the approximate number of tandem end-repeats (for HHV 4 and 8). The dark line is mardivirus 2 (Figure 3).