Table 3a:
Description of Wnt/β-catenin Genes Analyzed by Q-PCR.
Symbol
|
Gene
Name |
GenBank
Accession No. |
Function
|
CSNK1E |
Casein kinase 1, epsilon |
NM_001894 NM_152221 |
Serine/threonine protein kinase
found in cytoplasm. |
DKK3 |
Dickkopf 3 homolog |
NM_013253 NM_015881 NM_001018057 |
Secreted protein involved in
embryonic development via Wnt pathway. |
SFRP1 |
Secreted frizzled-related protein 1 |
NM_003012 |
Soluble modulator of Wnt signaling. Maybe involved in polarity of
photoreceptor cells. |
KREMEN1 |
Kringle containing transmembrane
protein 1 |
NM_032045 NM_153379 NM_001039570 NM_001039571 |
Involved in modulating Wnt signaling. |
WNT9A |
Wingless-type MMTV integration site
family, member 9A |
NM_003395 |
Member of WNT gene family that
encodes secreted signaling proteins. Expressed in gastric cancer cell lines. |
GSK3A |
Glycogen synthase kinase 3 alpha |
NM_019884 |
Multifunctional Ser/Thr protein kinase involved in WNT and PI3K signaling
pathways. |
RARA1 |
Retinoic acid receptor, alpha |
NM_000964 NM_001033603 NM_001145301 |
Nuclear retinoic acid receptor.
Regulates transcription. Involved with apoptosis, differentiation. |
LRP1 |
Low density lipoprotein receptor
-related protein 1 |
NM_002332 |
Endocytic receptor involved in intracellular
signaling, lipid homeostasis and clearance of apoptotic cells. |
MDM2 |
p53 E3 ubiquitin protein ligase
homolog |
NM_002392 NM_006878 NM_006880 NM_006881 NM_006882 NM_001145337 NM_001145339 |
Nuclear phosphoprotein
that inhibits transactivation by p53, has E3 ubiquitin ligase activity, and
affects cell cycle, apoptosis, and tumorigenesis. |
Table 3b: Description
of diabetes-related genes analyzed by Q-PCR.
Symbol |
Gene Name |
GenBank
Accession No. |
Function |
RPS6KA4
|
Ribosomal
protein S6 kinase,90kDa, polypeptide 4 |
NM_001006944
NM_003942
|
Member
of ribosomal S6 kinase family of Ser/Thr kinases. |
ADAMTS9
|
ADAM
metallopeptidase with thrombospondin
type 1 motif, 9 |
NM_182920 NM_182921
|
Member
of the ADAMTS (a disintegrin and metalloproteinase
with thrombospondin motifs) protein family.
Implicated in the cleavage of proteoglycans and the inhibition of
angiogenesis. |
VEGFA
|
Vascular
endothelial growth factor A |
NM_001025366 NM_001025367 NM_001025368 NM_001025369 NM_001025370 NM_001033756 NM_001171622 NM_001171623 NM_001171624 NM_001171625 NM_001171626 NM_001171627 NM_001171628 NM_001171629 NM_001171630 NM_001204384 NM_001204385 NM_003376
|
Member
of PDGF/VEGF growth factor family. Acts
on endothelial cells. Causes
increased vascular permeability, angiogenesis, vasculogenesis,
endothelial cell growth, cell migration, and inhibits apoptosis. Mutations
in this gene have been associated with proliferative and non-proliferative
diabetic retinopathy. |